pgmpy

dev branch

Getting Started

Installation
Contributing to pgmpy
License

Base Structures

Directed Acyclic Graph (DAG)
Partial Directed Acyclic Graph (PDAG)

Models

Bayesian Network
Dynamic Bayesian Network (DBN)
Structural Equation Models (SEM)
Naive Bayes
NoisyOr Model
Markov Network
Junction Tree
Cluster Graph
Factor Graph
Markov Chain

Parameterization

Discrete
Discretizing Methods

Exact Inference

Variable Elimination
Elimination Ordering
Belief Propagation
Causal Inference
MPLP
Dynamic Bayesian Network Inference
Model Testing

Approximate Inference

Approximate Inference Using Sampling
Bayesian Model Sampling
Gibbs Sampling

Parameter Estimation

Maximum Likelihood Estimator
Bayesian Estimator
Expectation Maximization (EM)
Structural Equation Model Estimators

Structure Learning

PC (Constraint-Based Estimator)
Conditional Independence Tests for PC algorithm
Hill Climb Search
Structure Score
Tree Search
Mmhc Estimator
Exhaustive Search

Model Testing

Metrics for testing models

Input/Output

BIF (Bayesian Interchange Format)
UAI
XMLBIF
PomdpX
XMLBeliefNetwork

Example Notebooks

1. Example Using the Earthquake network
2. Monty Hall Problem
3. Creating discrete Bayesian Networks
4. Inference in Discrete Bayesian Network
5. Causal Games
6. Causal Inference Examples
7. Parameter Learning in Discrete Bayesian Networks
8. Structure Learning in Bayesian Networks
9. Learning Tree Structure from Data using the Chow-Liu Algorithm
10. Learning Tree-augmented Naive Bayes (TAN) Structure from Data
11. Normal Bayesian Network (no time variation)
12. Extending pgmpy

Tutorial Notebooks

1. Introduction to Probabilitic Graphical Models
2. Bayesian Network
3. Causal Bayesian Networks
4. Markov Networks
5. Exact Inference in Graphical Models
6. Approximate Inference in Graphical Models
7. Parameterizing with Continuous Variables
8. Sampling In Continuous Graphical Models
9. Reading and Writing from pgmpy file formats
10. Learning Bayesian Networks from Data
11. A Bayesian Network to model the influence of energy consumption on greenhouse gases in Italy

pgmpy

Overview: module code

All modules for which code is available

builtins
pgmpy.base.DAG
pgmpy.estimators.BayesianEstimator
pgmpy.estimators.CITests
pgmpy.estimators.EM
pgmpy.estimators.ExhaustiveSearch
pgmpy.estimators.HillClimbSearch
pgmpy.estimators.MLE
pgmpy.estimators.MmhcEstimator
pgmpy.estimators.PC
pgmpy.estimators.SEMEstimator
pgmpy.estimators.StructureScore
pgmpy.estimators.TreeSearch
pgmpy.factors.continuous.discretize
pgmpy.factors.discrete.CPD
pgmpy.factors.discrete.DiscreteFactor
pgmpy.factors.discrete.JointProbabilityDistribution
pgmpy.inference.ApproxInference
pgmpy.inference.CausalInference
pgmpy.inference.EliminationOrder
pgmpy.inference.ExactInference
pgmpy.inference.dbn_inference
pgmpy.inference.mplp
pgmpy.metrics.bn_inference
pgmpy.metrics.metrics
pgmpy.models.BayesianNetwork
pgmpy.models.ClusterGraph
pgmpy.models.DynamicBayesianNetwork
pgmpy.models.FactorGraph
pgmpy.models.JunctionTree
pgmpy.models.MarkovChain
pgmpy.models.MarkovNetwork
pgmpy.models.NaiveBayes
pgmpy.models.NoisyOrModel
pgmpy.models.SEM
pgmpy.readwrite.BIF
pgmpy.readwrite.PomdpX
pgmpy.readwrite.UAI
pgmpy.readwrite.XMLBIF
pgmpy.readwrite.XMLBeliefNetwork
pgmpy.sampling.Sampling

© Copyright 2022, Ankur Ankan.

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